swirldev/swirl_courses
🎓 A collection of interactive courses for the swirl R package.
chris-mcginnis-ucsf/DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
sqjin/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
PecanProject/pecan
The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.
benjjneb/dada2
Accurate sample inference from amplicon data with single nucleotide resolution
joey711/phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
YuLab-SMU/clusterProfiler
📊 A universal enrichment tool for interpreting omics data