Trending of R since:

hadley/r4ds

R for data science: a book

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tidyverse/ggplot2

An implementation of the Grammar of Graphics in R

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satijalab/seurat

R toolkit for single cell genomics

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swirldev/swirl_courses

🎓 A collection of interactive courses for the swirl R package.

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rdpeng/ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

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Rdatatable/data.table

R's data.table package extends data.frame:

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immunogenomics/harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

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sqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

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joey711/phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

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stuart-lab/signac

R toolkit for the analysis of single-cell chromatin data

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plotly/plotly.R

An interactive graphing library for R

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broadinstitute/infercnv

Inferring CNV from Single-Cell RNA-Seq

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r-spatial/sf

Simple Features for R

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benjjneb/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

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YuLab-SMU/clusterProfiler

📊 A universal enrichment tool for interpreting omics data

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chris-mcginnis-ucsf/DoubletFinder

R package for detecting doublets in single-cell RNA sequencing data

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477 1
119