Trending of R since:

Rdatatable/data.table

R's data.table package extends data.frame:

R
3,647 1
992

rstudio/rmarkdown

Dynamic Documents for R

R
2,896 1
981

satijalab/seurat

R toolkit for single cell genomics

R
2,343 2
925

tidyverse/ggplot2

An implementation of the Grammar of Graphics in R

R
6,589 2
2,040

r-spatial/sf

Simple Features for R

R
1,357 1
301

joey711/phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

R
595 1
188

broadinstitute/infercnv

Inferring CNV from Single-Cell RNA-Seq

R
588 3
170

sqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

R
657 1
150

tidyverse/dplyr

dplyr: A grammar of data manipulation

R
4,812 0
2,124

stuart-lab/signac

R toolkit for the analysis of single-cell chromatin data

R
344 1
93

rmaia/pavo

tools for the analysis of color data in R

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71 0
17

thomasp85/patchwork

The Composer of ggplots

R
2,499 2
162

YuLab-SMU/clusterProfiler

📊 A universal enrichment tool for interpreting omics data

R
1,051 2
255

r-lib/devtools

Tools to make an R developer's life easier

R
2,414 0
759

rstudio/renv

renv: Project environments for R.

R
1,031 1
153

benjjneb/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

R
485 1
144

jokergoo/ComplexHeatmap

Make Complex Heatmaps

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1,333 2
229

jbengler/tidyplots

Tidy Plots for Scientific Papers

R
371 2
9

kassambara/ggpubr

'ggplot2' Based Publication Ready Plots

R
1,150 1
165

vegandevs/vegan

R package for community ecologists: popular ordination methods, ecological null models & diversity analysis

R
467 0
97