jokergoo/ComplexHeatmap

Make Complex Heatmaps

Rdatatable/data.table

R's data.table package extends data.frame:

satijalab/seurat

R toolkit for single cell genomics

broadinstitute/infercnv

Inferring CNV from Single-Cell RNA-Seq

tidyverse/ellmer

Call LLM APIs from R

sqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

chris-mcginnis-ucsf/DoubletFinder

R package for detecting doublets in single-cell RNA sequencing data

tidyverse/ggplot2

An implementation of the Grammar of Graphics in R

satijalab/seurat-wrappers

Community-provided extensions to Seurat

tidyverse/ragnar

rstudio/reticulate

R Interface to Python

saeyslab/nichenetr

NicheNet: predict active ligand-target links between interacting cells

benjjneb/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

r-lib/tree-sitter-r

Tree-sitter grammar for R

rstudio/renv

renv: Project environments for R.

kassambara/ggpubr

'ggplot2' Based Publication Ready Plots

stuart-lab/signac

R toolkit for the analysis of single-cell chromatin data

rdpeng/ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

swirldev/swirl_courses

🎓 A collection of interactive courses for the swirl R package.

tidyverse/dplyr

dplyr: A grammar of data manipulation