rdpeng/ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

satijalab/seurat

R toolkit for single cell genomics

benjjneb/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

rstudio/reticulate

R Interface to Python

stuart-lab/signac

R toolkit for the analysis of single-cell chromatin data

r-spatial/sf

Simple Features for R

prisma-flowdiagram/PRISMA2020

Produce PRISMA-2020 compliant flow diagrams

sqjin/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

rmaia/pavo

tools for the analysis of color data in R

cole-trapnell-lab/monocle3

immunogenomics/harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

topepo/caret

caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

chris-mcginnis-ucsf/DoubletFinder

R package for detecting doublets in single-cell RNA sequencing data

jokergoo/ComplexHeatmap

Make Complex Heatmaps